Browse of TCMCG057C12799 protein

CDS

Accession Number	TCMCG057C12799
gbkey	CDS
Protein Id	XP_018475817.1
Location	complement(20238629..20240950)
Gene	LOC108847127
GeneID	108847127
Organism	Raphanus sativus

Protein

Length	773aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA344915
db_source	XM_018620315.1
Definition	PREDICTED: branchpoint-bridging protein [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Splicing factor 1 helix-hairpin domain
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko03041        [VIEW IN KEGG]
KEGG_ko	ko:K13095        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0001101        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0008380        [VIEW IN EMBL-EBI] GO:0009719        [VIEW IN EMBL-EBI] GO:0009725        [VIEW IN EMBL-EBI] GO:0009737        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010033        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0033993        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0042221        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097305        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901700        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGATTCCGTCGAATTGAATCCTTCTTCCCATCCCCTCGATCAACCTCCTCGTCCTGCTTCCTCTGAAACCGTAGCTTCCCTCAAGGATGATAACTCTGCTTCCCTCGCCCCCGATCAGATTCCTGCTCCCGAAGCTACCAACGGCTCCTCTAACGGCGTTACCGGTGACGACAAGAACAAATCCGAGGACACCACAACCCGGAGGAAGCGTCGGAGCAGGTGGGATCCTCCTCCTTCCGAGTCGGTTACCAACACGAGCGCCGAAGGTGGCGGCGGTGGCGACTCCGGTACTAGGAAGCGTAAGTCGAGATGGGCTGACGACGAGCCGAAGCCGACGATTCAGCTGCCCGATTACATCAAGGAGATCGTCGGAGGTATCGAGTTCGATCCCGAGATTCAGGTTTTGAACAGCAGGTTGCTTGATATCAGTAGGCTGCTTCAGTCCGGTATGGCTTTGGATGATAGACCCGAGGGGCAGAGGTCTCCCTCGCCGGAGCCCGTGTATGATAACATGGGGATTAGGATCAACACTAGGGAGTACAGAGCGAGGGAGAGGTTGAATAGAGAGAGGCAAGAGATTATATCTCAGATTATTAAAAAGAATCCTGCTTTTAAACCACCCGCGGATTACAGGCCTCCCAAGCTCCAGAAGAAGCTGTTCATTCCGATGAAGGACTATCCCGGTTATAATTTCATTGGTCTTATTATTGGTCCCAGGGGGAATACTCAGAAGAGGATGGAGAGGGAGACTGGTGCTAAGATTGTGATTAGGGGTAAAGGGTCTATGAAGGAAGGTAGGCTGCAGAAGAAGGATATGAAGTACGACCCTGCTGAAAATGAGGATTTGCATGTTTTGGTTGAGGCTGAGACTCAGGAGGCACTTGAAGCTGCTGCTGGTATGGTCGAGAAGCTTCTTCAGCCTGTTGATGAGGTACTGAACGAACACAAGAGGCAACAGCTGAGGGAGCTTGCTACCTTGAATGGTACTATAAGGGATGAAGAGTTCTGTAGGCTGTGTGGTGAGCCAGGACATAGGCAGTTCGCGTGTCCATCTCGTTTGAATACCTTTAAAAGTGATGTGCTTTGCAAGATTTGTGGTGATGGTGGACACCCTACTATTGATTGCCCTGTGAAGGATACTAATGGGAAGAAAATGGATGATGAATATCAGAACTTTTTGGCTGAGTTAGGAGGAACTCTCCCTGAATCTTCTCTCAAACAGAGTACTAATACCTTGGCTCTTGGTCCGGGAAGTTCTGGAAGTAATCCTCCATGGGCTAGCAATGGGGGCAGTGGGGCAAGTGCGCATCCTGGCTTAGGGTCAAATCCAGCCAAACCCTCCAAAGAATATGATGAAAAAAATCTCTACATTGGGTTCTTACCTACGATGCTTGAGGACGATGGTTTGATTAATCTTTTTTCACCCTTTGGCGAAATTGTGATGGCAAAGGTAATAAAGGACCATATTTCTGGTCTGAGCAGAGGCTATGGTTTTGTGAAGTACGCAGATGTCCAGATGGCCAATTCGGCGATACAGGCAATGAATGGTTATCGGTTAGAAGGTAAAACACTTGCTGTCAGGATTGCTGGTAAACCGGCACCGCCTCCTGGGCCCCCGGCACCTCCCCCACCTACTCAATCTTATCCTCCTCCACCATCACAACCATATGGCGCTGGTGGGCAACTGCCAAATCCTTCATATTCACCGGCTCCAGTTCCTTGGGGTCCTCCTGTTCCTTCCTATTCACAATATGCTCCTCCGCCTCCTCCTGGTTCTTACCATCCCGTCCCTGGTCAACACATGTCTCCTTATGGAATGCACTACCCACCACCACCACCACCTCCTCATGTGACACAAGCTCCTCCACCTGGCACTACTACTAGTGAAAGCCAGCAAAGCTTCCCACCAGGAGTAGTACAAGCAGACAGTGGTACTCCTCCTCCATCTGTGCCACCAAATGTCTATGGTGGTTCGCTTTCAGGTGTGCCTGGACAGCCTCCGTATATGAGTTATCCATCTTATTACGCTGCTGTTCCACCTCCACCTCCACCTCCAGTGCCGACCTCGTCTGCTGATCATTCCCAAAGCATGGGTAACATGCCGTGGGCGAACAATCCTCCTATGCCGTCATCTGATCACTCGCAAGGTGTAGGTAATGCACCTTGGGCACCTAATCCTCCTCTGCCACCTTCTGTTGGATATTCGCAGAGCATGGGGAACGCACCCTGGGCTCCCAAGCCTCCAGTTCAGCCACCTGCAGAGAATCCATCCGCTGTTGGAGATTCTGAGTATGAGAAGTTCATGGCTGAGATGAAGTAG

Protein:   MDSVELNPSSHPLDQPPRPASSETVASLKDDNSASLAPDQIPAPEATNGSSNGVTGDDKNKSEDTTTRRKRRSRWDPPPSESVTNTSAEGGGGGDSGTRKRKSRWADDEPKPTIQLPDYIKEIVGGIEFDPEIQVLNSRLLDISRLLQSGMALDDRPEGQRSPSPEPVYDNMGIRINTREYRARERLNRERQEIISQIIKKNPAFKPPADYRPPKLQKKLFIPMKDYPGYNFIGLIIGPRGNTQKRMERETGAKIVIRGKGSMKEGRLQKKDMKYDPAENEDLHVLVEAETQEALEAAAGMVEKLLQPVDEVLNEHKRQQLRELATLNGTIRDEEFCRLCGEPGHRQFACPSRLNTFKSDVLCKICGDGGHPTIDCPVKDTNGKKMDDEYQNFLAELGGTLPESSLKQSTNTLALGPGSSGSNPPWASNGGSGASAHPGLGSNPAKPSKEYDEKNLYIGFLPTMLEDDGLINLFSPFGEIVMAKVIKDHISGLSRGYGFVKYADVQMANSAIQAMNGYRLEGKTLAVRIAGKPAPPPGPPAPPPPTQSYPPPPSQPYGAGGQLPNPSYSPAPVPWGPPVPSYSQYAPPPPPGSYHPVPGQHMSPYGMHYPPPPPPPHVTQAPPPGTTTSESQQSFPPGVVQADSGTPPPSVPPNVYGGSLSGVPGQPPYMSYPSYYAAVPPPPPPPVPTSSADHSQSMGNMPWANNPPMPSSDHSQGVGNAPWAPNPPLPPSVGYSQSMGNAPWAPKPPVQPPAENPSAVGDSEYEKFMAEMK